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  5. Brara.J00786.1

Brara.J00786.1


Description : carotenoid beta ring hydroxylase


Gene families : OG_42_0002239 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J00786.1
Cluster HCAA Clusters: Cluster_399

Target Alias Description ECC score Gene Family Method Actions
126723 No alias beta-hydroxylase 1 0.02 Orthogroups_2024-Update
A4A49_26103 No alias beta-carotene hydroxylase 2, chloroplastic 0.03 Orthogroups_2024-Update
MA_11183g0010 No alias (at4g25700 : 272.0) Converts beta-carotene to zeaxanthin... 0.02 Orthogroups_2024-Update
MA_439703g0010 No alias (at4g25700 : 330.0) Converts beta-carotene to zeaxanthin... 0.03 Orthogroups_2024-Update
Potri.017G145700 No alias beta-hydroxylase 1 0.03 Orthogroups_2024-Update
Sobic.006G188200.2 No alias carotenoid beta ring hydroxylase 0.03 Orthogroups_2024-Update
Sopen03g003900 No alias Fatty acid hydroxylase superfamily 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA 16Dec
BP GO:0008610 lipid biosynthetic process IEA 16Dec
MF GO:0016491 oxidoreductase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
InterPro domains Description Start Stop
IPR006694 Fatty_acid_hydroxylase 144 271
No external refs found!