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  5. Brara.J00918.1

Brara.J00918.1


Description : BBX class-V transcription factor


Gene families : OG_42_0000803 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000803_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J00918.1
Cluster HCAA Clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
49712 No alias B-box type zinc finger family protein 0.02 Orthogroups_2024-Update
Bradi1g52360 No alias B-box type zinc finger protein with CCT domain 0.03 Orthogroups_2024-Update
Brara.A02749.1 No alias BBX class-V transcription factor 0.04 Orthogroups_2024-Update
Brara.C03818.1 No alias BBX class-V transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G085218 No alias B-box 32 0.03 Orthogroups_2024-Update
Glyma.15G065900 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
LOC_Os02g07930 No alias B-box zinc finger family protein, putative, expressed 0.05 Orthogroups_2024-Update
MA_10430891g0010 No alias (at4g27310 : 113.0) B-box type zinc finger family... 0.05 Orthogroups_2024-Update
MA_10432136g0020 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_332069g0010 No alias (at5g54470 : 94.4) B-box type zinc finger family... 0.04 Orthogroups_2024-Update
MA_61108g0010 No alias (at3g21150 : 86.7) Encodes a protein with a B-box domain... 0.03 Orthogroups_2024-Update
Mp3g20050.1 No alias no hits & (original description: none) 0.03 Orthogroups_2024-Update
Pp1s22_52V6 No alias F24B18.9; CONSTANS B-box zinc finger family protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 4 45
No external refs found!