1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.J00925.1

Brara.J00925.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000033 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J00925.1
Cluster HCAA Clusters: Cluster_337

Target Alias Description ECC score Gene Family Method Actions
144295 No alias beta glucosidase 40 0.02 Orthogroups_2024-Update
268527 No alias beta glucosidase 40 0.02 Orthogroups_2024-Update
408050 No alias beta glucosidase 41 0.02 Orthogroups_2024-Update
73365 No alias beta glucosidase 27 0.02 Orthogroups_2024-Update
A4A49_12224 No alias beta-glucosidase 44 0.03 Orthogroups_2024-Update
Bradi2g27770 No alias beta glucosidase 11 0.02 Orthogroups_2024-Update
Bradi3g45627 No alias beta glucosidase 11 0.03 Orthogroups_2024-Update
Bradi4g34940 No alias beta glucosidase 11 0.03 Orthogroups_2024-Update
Brara.D00183.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.K01020.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Glyma.07G151900 No alias beta glucosidase 11 0.03 Orthogroups_2024-Update
LOC_Os09g31410 No alias Os9bglu29 - beta-glucosidase homologue, similar to... 0.03 Orthogroups_2024-Update
MA_10344118g0010 No alias (at1g26560 : 401.0) beta glucosidase 40 (BGLU40);... 0.03 Orthogroups_2024-Update
MA_10394370g0010 No alias (at1g26560 : 528.0) beta glucosidase 40 (BGLU40);... 0.03 Orthogroups_2024-Update
MA_483593g0010 No alias (at1g26560 : 478.0) beta glucosidase 40 (BGLU40);... 0.03 Orthogroups_2024-Update
PSME_00006839-RA No alias (at5g54570 : 95.9) beta glucosidase 41 (BGLU41);... 0.03 Orthogroups_2024-Update
PSME_00009698-RA No alias (at2g44480 : 426.0) beta glucosidase 17 (BGLU17);... 0.03 Orthogroups_2024-Update
PSME_00011816-RA No alias (at3g18080 : 295.0) B-S glucosidase 44 (BGLU44);... 0.03 Orthogroups_2024-Update
PSME_00019735-RA No alias (at1g26560 : 751.0) beta glucosidase 40 (BGLU40);... 0.03 Orthogroups_2024-Update
PSME_00030152-RA No alias (at2g44480 : 460.0) beta glucosidase 17 (BGLU17);... 0.04 Orthogroups_2024-Update
Potri.001G225900 No alias beta glucosidase 16 0.04 Orthogroups_2024-Update
Seita.4G255800.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sopen02g025000 No alias Glycosyl hydrolase family 1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
InterPro domains Description Start Stop
IPR001360 Glyco_hydro_1 29 503
No external refs found!