Brara.J01049.1

Description : STAR-type post-transcriptionally regulatory factor

Gene families : OG_42_0000701 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000701_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.J01049.1
Cluster	HCAA Clusters: Cluster_64

Target	Alias	Description	ECC score	Gene Family Method
Pp1s269_38V6	No alias	quaking isoform 5-like	0.03	Orthogroups_2024-Update
Sobic.002G081100.1	No alias	STAR-type post-transcriptionally regulatory factor	0.03	Orthogroups_2024-Update
Sopen06g034080	No alias	hypothetical protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
CC	GO:0005618	cell wall	IEP	Predicted GO
CC	GO:0005667	transcription factor complex	IEP	Predicted GO
CC	GO:0005694	chromosome	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0005984	disaccharide metabolic process	IEP	Predicted GO
BP	GO:0005985	sucrose metabolic process	IEP	Predicted GO
BP	GO:0009311	oligosaccharide metabolic process	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
MF	GO:0016157	sucrose synthase activity	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predicted GO
MF	GO:0030145	manganese ion binding	IEP	Predicted GO
CC	GO:0030312	external encapsulating structure	IEP	Predicted GO
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
CC	GO:0048046	apoplast	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR032377	STAR_dimer	53	91

External Links

No external refs found!