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  5. Brara.J01073.1

Brara.J01073.1


Description : Unknown function


Gene families : OG_42_0000123 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000123_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J01073.1
Cluster HCAA Clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
A4A49_41150 No alias agglutinin 0.03 Orthogroups_2024-Update
At1g52100 No alias Mannose-binding lectin superfamily protein... 0.04 Orthogroups_2024-Update
At1g58160 No alias Jacalin-related lectin 15... 0.04 Orthogroups_2024-Update
Brara.D02381.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.F01397.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.14G194450 No alias Mannose-binding lectin superfamily protein 0.05 Orthogroups_2024-Update
LOC_Os01g25030 No alias dirigent, putative 0.03 Orthogroups_2024-Update
LOC_Os06g07300 No alias jacalin-like lectin domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00002592-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Seita.5G288900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G040500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G225500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G021300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen04g034000 No alias Jacalin-like lectin domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
InterPro domains Description Start Stop
IPR001229 Jacalin-like_lectin_dom 13 143
IPR001229 Jacalin-like_lectin_dom 161 285
IPR001229 Jacalin-like_lectin_dom 330 461
No external refs found!