Brara.J01079.1

Description : Unknown function

Gene families : OG_42_0001160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001160_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.J01079.1
Cluster	HCAA Clusters: Cluster_141

Target	Alias	Description	ECC score	Gene Family Method	Actions
At1g22240	No alias	Putative pumilio homolog 8, chloroplastic...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003916	DNA topoisomerase activity	IEP	Predicted GO
MF	GO:0003917	DNA topoisomerase type I activity	IEP	Predicted GO
BP	GO:0006265	DNA topological change	IEP	Predicted GO
MF	GO:0016670	oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016972	thiol oxidase activity	IEP	Predicted GO
BP	GO:0070070	proton-transporting V-type ATPase complex assembly	IEP	Predicted GO
BP	GO:0070071	proton-transporting two-sector ATPase complex assembly	IEP	Predicted GO
BP	GO:0070072	vacuolar proton-transporting V-type ATPase complex assembly	IEP	Predicted GO
BP	GO:0071103	DNA conformation change	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	281	313
IPR001313	Pumilio_RNA-bd_rpt	506	525
IPR001313	Pumilio_RNA-bd_rpt	466	498
IPR001313	Pumilio_RNA-bd_rpt	358	386
IPR001313	Pumilio_RNA-bd_rpt	430	448
IPR001313	Pumilio_RNA-bd_rpt	393	426
IPR001313	Pumilio_RNA-bd_rpt	245	278
IPR001313	Pumilio_RNA-bd_rpt	321	353

External Links

No external refs found!