Description : component *(eL31) of large ribosomal-subunit (LSU) proteome
Gene families : OG_42_0001913 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001913_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.J01097.1 | |
Cluster | HCAA Clusters: Cluster_91 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
268515 | No alias | Ribosomal protein L31e family protein | 0.14 | Orthogroups_2024-Update | |
A4A49_04515 | No alias | 60s ribosomal protein l31 | 0.04 | Orthogroups_2024-Update | |
At2g19740 | No alias | 60S ribosomal protein L31-1... | 0.03 | Orthogroups_2024-Update | |
Bradi3g39870 | No alias | Ribosomal protein L31e family protein | 0.19 | Orthogroups_2024-Update | |
Bradi3g53460 | No alias | Ribosomal protein L31e family protein | 0.18 | Orthogroups_2024-Update | |
Brara.I04723.1 | No alias | component *(eL31) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
Cre12.g489153 | No alias | Ribosomal protein L31e family protein | 0.13 | Orthogroups_2024-Update | |
GRMZM2G074085 | No alias | Ribosomal protein L31e family protein | 0.07 | Orthogroups_2024-Update | |
Glyma.01G004300 | No alias | Ribosomal protein L31e family protein | 0.23 | Orthogroups_2024-Update | |
Glyma.05G223800 | No alias | Ribosomal protein L31e family protein | 0.06 | Orthogroups_2024-Update | |
Glyma.07G127500 | No alias | Ribosomal protein L31e family protein | 0.18 | Orthogroups_2024-Update | |
Glyma.08G030900 | No alias | Ribosomal protein L31e family protein | 0.09 | Orthogroups_2024-Update | |
HORVU6Hr1G070670.1 | No alias | component *(eL31) of large ribosomal-subunit (LSU) proteome | 0.12 | Orthogroups_2024-Update | |
HORVU7Hr1G050170.1 | No alias | component *(eL31) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Kfl00006_0140 | kfl00006_0140_v1.1 | (at2g19740 : 154.0) Ribosomal protein L31e family... | 0.12 | Orthogroups_2024-Update | |
Mp7g18320.1 | No alias | component RPL31 of LSU proteome component | 0.03 | Orthogroups_2024-Update | |
Potri.001G269600 | No alias | Ribosomal protein L31e family protein | 0.08 | Orthogroups_2024-Update | |
Potri.009G064100 | No alias | Ribosomal protein L31e family protein | 0.11 | Orthogroups_2024-Update | |
Potri.018G070100 | No alias | Ribosomal protein L31e family protein | 0.05 | Orthogroups_2024-Update | |
Pp1s28_306V6 | No alias | 60s ribosomal protein l31a | 0.07 | Orthogroups_2024-Update | |
Pp1s30_365V6 | No alias | 60s ribosomal protein l31a | 0.19 | Orthogroups_2024-Update | |
Pp1s50_89V6 | No alias | 60s ribosomal protein l31a | 0.16 | Orthogroups_2024-Update | |
Pp1s58_106V6 | No alias | 60s ribosomal protein l31a | 0.11 | Orthogroups_2024-Update | |
Pp1s79_255V6 | No alias | 60s ribosomal protein l31a | 0.12 | Orthogroups_2024-Update | |
Seita.1G297300.1 | No alias | component *(eL31) of large ribosomal-subunit (LSU) proteome | 0.23 | Orthogroups_2024-Update | |
Seita.6G204000.1 | No alias | component *(eL31) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Sobic.004G259700.1 | No alias | component *(eL31) of large ribosomal-subunit (LSU) proteome | 0.26 | Orthogroups_2024-Update | |
Sobic.007G211700.1 | No alias | component *(eL31) of large ribosomal-subunit (LSU) proteome | 0.14 | Orthogroups_2024-Update | |
Solyc12g008720 | No alias | 60S ribosomal protein L31 (AHRD V3.3 *** W9QLF2_9ROSA) | 0.24 | Orthogroups_2024-Update | |
Sopen05g003860 | No alias | Ribosomal protein L31e | 0.05 | Orthogroups_2024-Update | |
Sopen12g003650 | No alias | Ribosomal protein L31e | 0.16 | Orthogroups_2024-Update | |
evm.model.contig_477.12 | No alias | (q9mav7|rl31_pangi : 120.0) 60S ribosomal protein L31 -... | 0.19 | Orthogroups_2024-Update | |
evm.model.tig00020703.20 | No alias | (q9mav7|rl31_pangi : 155.0) 60S ribosomal protein L31 -... | 0.09 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
CC | GO:0005840 | ribosome | IEA | 16Dec |
BP | GO:0006412 | translation | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0003883 | CTP synthase activity | IEP | Predicted GO |
MF | GO:0004146 | dihydrofolate reductase activity | IEP | Predicted GO |
MF | GO:0004455 | ketol-acid reductoisomerase activity | IEP | Predicted GO |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predicted GO |
MF | GO:0004819 | glutamine-tRNA ligase activity | IEP | Predicted GO |
CC | GO:0005737 | cytoplasm | IEP | Predicted GO |
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predicted GO |
BP | GO:0006425 | glutaminyl-tRNA aminoacylation | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Predicted GO |
BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009117 | nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Predicted GO |
CC | GO:0015934 | large ribosomal subunit | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016874 | ligase activity | IEP | Predicted GO |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predicted GO |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Predicted GO |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
CC | GO:0019867 | outer membrane | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0043038 | amino acid activation | IEP | Predicted GO |
BP | GO:0043039 | tRNA aminoacylation | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
CC | GO:0044391 | ribosomal subunit | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
BP | GO:0046653 | tetrahydrofolate metabolic process | IEP | Predicted GO |
BP | GO:0046654 | tetrahydrofolate biosynthetic process | IEP | Predicted GO |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Predicted GO |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000054 | Ribosomal_L31e | 10 | 91 |
No external refs found! |