Brara.J01097.1


Description : component *(eL31) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0001913 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001913_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J01097.1
Cluster HCAA Clusters: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
268515 No alias Ribosomal protein L31e family protein 0.14 Orthogroups_2024-Update
A4A49_04515 No alias 60s ribosomal protein l31 0.04 Orthogroups_2024-Update
At2g19740 No alias 60S ribosomal protein L31-1... 0.03 Orthogroups_2024-Update
Bradi3g39870 No alias Ribosomal protein L31e family protein 0.19 Orthogroups_2024-Update
Bradi3g53460 No alias Ribosomal protein L31e family protein 0.18 Orthogroups_2024-Update
Brara.I04723.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Cre12.g489153 No alias Ribosomal protein L31e family protein 0.13 Orthogroups_2024-Update
GRMZM2G074085 No alias Ribosomal protein L31e family protein 0.07 Orthogroups_2024-Update
Glyma.01G004300 No alias Ribosomal protein L31e family protein 0.23 Orthogroups_2024-Update
Glyma.05G223800 No alias Ribosomal protein L31e family protein 0.06 Orthogroups_2024-Update
Glyma.07G127500 No alias Ribosomal protein L31e family protein 0.18 Orthogroups_2024-Update
Glyma.08G030900 No alias Ribosomal protein L31e family protein 0.09 Orthogroups_2024-Update
HORVU6Hr1G070670.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
HORVU7Hr1G050170.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Kfl00006_0140 kfl00006_0140_v1.1 (at2g19740 : 154.0) Ribosomal protein L31e family... 0.12 Orthogroups_2024-Update
Mp7g18320.1 No alias component RPL31 of LSU proteome component 0.03 Orthogroups_2024-Update
Potri.001G269600 No alias Ribosomal protein L31e family protein 0.08 Orthogroups_2024-Update
Potri.009G064100 No alias Ribosomal protein L31e family protein 0.11 Orthogroups_2024-Update
Potri.018G070100 No alias Ribosomal protein L31e family protein 0.05 Orthogroups_2024-Update
Pp1s28_306V6 No alias 60s ribosomal protein l31a 0.07 Orthogroups_2024-Update
Pp1s30_365V6 No alias 60s ribosomal protein l31a 0.19 Orthogroups_2024-Update
Pp1s50_89V6 No alias 60s ribosomal protein l31a 0.16 Orthogroups_2024-Update
Pp1s58_106V6 No alias 60s ribosomal protein l31a 0.11 Orthogroups_2024-Update
Pp1s79_255V6 No alias 60s ribosomal protein l31a 0.12 Orthogroups_2024-Update
Seita.1G297300.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.23 Orthogroups_2024-Update
Seita.6G204000.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Sobic.004G259700.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.26 Orthogroups_2024-Update
Sobic.007G211700.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Solyc12g008720 No alias 60S ribosomal protein L31 (AHRD V3.3 *** W9QLF2_9ROSA) 0.24 Orthogroups_2024-Update
Sopen05g003860 No alias Ribosomal protein L31e 0.05 Orthogroups_2024-Update
Sopen12g003650 No alias Ribosomal protein L31e 0.16 Orthogroups_2024-Update
evm.model.contig_477.12 No alias (q9mav7|rl31_pangi : 120.0) 60S ribosomal protein L31 -... 0.19 Orthogroups_2024-Update
evm.model.tig00020703.20 No alias (q9mav7|rl31_pangi : 155.0) 60S ribosomal protein L31 -... 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004146 dihydrofolate reductase activity IEP Predicted GO
MF GO:0004455 ketol-acid reductoisomerase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004819 glutamine-tRNA ligase activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0046653 tetrahydrofolate metabolic process IEP Predicted GO
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000054 Ribosomal_L31e 10 91
No external refs found!