1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.J01109.1

Brara.J01109.1


Description : transcription factor *(A/B-GATA)


Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J01109.1
Cluster HCAA Clusters: Cluster_353

Target Alias Description ECC score Gene Family Method Actions
AC202864.3_FG002 No alias GATA transcription factor 12 0.03 Orthogroups_2024-Update
At2g18380 No alias HANL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWM7] 0.03 Orthogroups_2024-Update
At5g56860 No alias GATA transcription factor 21... 0.03 Orthogroups_2024-Update
Glyma.08G142500 No alias GATA type zinc finger transcription factor family protein 0.04 Orthogroups_2024-Update
MA_82238g0030 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00051947-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.008G038900 No alias GATA transcription factor 9 0.03 Orthogroups_2024-Update
Potri.013G059600 No alias GATA transcription factor 12 0.03 Orthogroups_2024-Update
Solyc08g066510 No alias GATA transcription factor (AHRD V3.3 *** K4CLM7_SOLLC) 0.02 Orthogroups_2024-Update
Sopen01g036490 No alias GATA zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
MF GO:0043565 sequence-specific DNA binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0010206 photosystem II repair IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
BP GO:0010257 NADH dehydrogenase complex assembly IEP Predicted GO
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0030091 protein repair IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR000679 Znf_GATA 224 258
No external refs found!