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  5. Brara.J01150.1

Brara.J01150.1


Description : Unknown function


Gene families : OG_42_0009348 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009348_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J01150.1
Cluster HCAA Clusters: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G036870.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 684 732
IPR002885 Pentatricopeptide_repeat 753 802
IPR002885 Pentatricopeptide_repeat 276 325
IPR002885 Pentatricopeptide_repeat 347 395
IPR002885 Pentatricopeptide_repeat 518 562
IPR002885 Pentatricopeptide_repeat 478 509
IPR002885 Pentatricopeptide_repeat 200 222
IPR002885 Pentatricopeptide_repeat 831 852
IPR002885 Pentatricopeptide_repeat 653 674
IPR002885 Pentatricopeptide_repeat 137 160
IPR002885 Pentatricopeptide_repeat 591 616
IPR002885 Pentatricopeptide_repeat 414 444
No external refs found!