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  5. Brara.J01321.1

Brara.J01321.1


Description : GRAS-type transcription factor


Gene families : OG_42_0000237 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000237_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J01321.1
Cluster HCAA Clusters: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
Bradi4g43680 No alias GRAS family transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G346706 No alias SCARECROW-like 14 0.02 Orthogroups_2024-Update
Glyma.15G036900 No alias SCARECROW-like 14 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003873 6-phosphofructo-2-kinase activity IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
BP GO:0006000 fructose metabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
BP GO:0006476 protein deacetylation IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Predicted GO
CC GO:0008290 F-actin capping protein complex IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
BP GO:0010639 negative regulation of organelle organization IEP Predicted GO
BP GO:0016575 histone deacetylation IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0019781 NEDD8 activating enzyme activity IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
BP GO:0030832 regulation of actin filament length IEP Predicted GO
BP GO:0030833 regulation of actin filament polymerization IEP Predicted GO
BP GO:0030834 regulation of actin filament depolymerization IEP Predicted GO
BP GO:0030835 negative regulation of actin filament depolymerization IEP Predicted GO
BP GO:0030837 negative regulation of actin filament polymerization IEP Predicted GO
BP GO:0031333 negative regulation of protein complex assembly IEP Predicted GO
BP GO:0032271 regulation of protein polymerization IEP Predicted GO
BP GO:0032272 negative regulation of protein polymerization IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
BP GO:0032535 regulation of cellular component size IEP Predicted GO
BP GO:0032956 regulation of actin cytoskeleton organization IEP Predicted GO
BP GO:0032970 regulation of actin filament-based process IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
BP GO:0035601 protein deacylation IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
BP GO:0043242 negative regulation of protein complex disassembly IEP Predicted GO
BP GO:0043244 regulation of protein complex disassembly IEP Predicted GO
BP GO:0043254 regulation of protein complex assembly IEP Predicted GO
BP GO:0043484 regulation of RNA splicing IEP Predicted GO
BP GO:0044087 regulation of cellular component biogenesis IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
BP GO:0045116 protein neddylation IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0050684 regulation of mRNA processing IEP Predicted GO
BP GO:0051016 barbed-end actin filament capping IEP Predicted GO
BP GO:0051129 negative regulation of cellular component organization IEP Predicted GO
BP GO:0051493 regulation of cytoskeleton organization IEP Predicted GO
BP GO:0051494 negative regulation of cytoskeleton organization IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0051693 actin filament capping IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
BP GO:0090066 regulation of anatomical structure size IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
BP GO:0098732 macromolecule deacylation IEP Predicted GO
BP GO:0110053 regulation of actin filament organization IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
BP GO:1901879 regulation of protein depolymerization IEP Predicted GO
BP GO:1901880 negative regulation of protein depolymerization IEP Predicted GO
BP GO:1902903 regulation of supramolecular fiber organization IEP Predicted GO
BP GO:1902904 negative regulation of supramolecular fiber organization IEP Predicted GO
BP GO:1903311 regulation of mRNA metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005202 TF_GRAS 213 587
No external refs found!