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  5. Brara.J01366.1

Brara.J01366.1


Description : lignin laccase & EC_1.10 oxidoreductase acting on diphenol or related substance as donor


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J01366.1
Cluster HCAA Clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
A4A49_13303 No alias laccase-7 0.03 Orthogroups_2024-Update
At5g01190 No alias Laccase-10 [Source:UniProtKB/Swiss-Prot;Acc:Q6ID18] 0.03 Orthogroups_2024-Update
At5g03260 No alias Laccase-11 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZA1] 0.03 Orthogroups_2024-Update
Bradi2g23350 No alias laccase 17 0.02 Orthogroups_2024-Update
GRMZM2G336337 No alias laccase 12 0.03 Orthogroups_2024-Update
GRMZM2G447271 No alias laccase 17 0.02 Orthogroups_2024-Update
GRMZM5G814718 No alias laccase 5 0.04 Orthogroups_2024-Update
Glyma.11G137500 No alias laccase 2 0.03 Orthogroups_2024-Update
Glyma.14G198900 No alias laccase 3 0.03 Orthogroups_2024-Update
HORVU5Hr1G047480.3 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
LOC_Os05g38390 No alias laccase precursor protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os05g38420 No alias laccase precursor protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_33288g0010 No alias (at5g05390 : 575.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
MA_57140g0020 No alias (at5g05390 : 788.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00003270-RA No alias (at5g60020 : 723.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00028271-RA No alias (at5g05390 : 745.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00031560-RA No alias (at5g05390 : 678.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00035589-RA No alias (at5g05390 : 699.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00039722-RA No alias (at5g05390 : 721.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00042058-RA No alias (at5g05390 : 793.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00042485-RA No alias (at5g05390 : 782.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
Potri.001G248700 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
Potri.006G087100 No alias laccase 17 0.04 Orthogroups_2024-Update
Potri.006G087500 No alias laccase 17 0.02 Orthogroups_2024-Update
Potri.008G073700 No alias laccase 5 0.03 Orthogroups_2024-Update
Potri.010G193100 No alias Laccase/Diphenol oxidase family protein 0.04 Orthogroups_2024-Update
Potri.011G120300 No alias laccase 17 0.05 Orthogroups_2024-Update
Potri.016G106000 No alias laccase 7 0.03 Orthogroups_2024-Update
Seita.5G378200.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Seita.7G330200.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Sobic.005G005800.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Solyc02g062650 No alias Laccase (AHRD V3.3 *** I1J8U1_SOYBN) 0.04 Orthogroups_2024-Update
Solyc09g014240 No alias Laccase (AHRD V3.3 *** P93366_TOBAC) 0.03 Orthogroups_2024-Update
Sopen02g029810 No alias Multicopper oxidase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA 16Dec
MF GO:0016491 oxidoreductase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR011707 Cu-oxidase_3 32 145
IPR011706 Cu-oxidase_2 424 555
IPR001117 Cu-oxidase 158 309
No external refs found!