Brara.J01371.1

Description : AP2-type transcription factor *(WRI/AIL)

Gene families : OG_42_0000060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.J01371.1
Cluster	HCAA Clusters: Cluster_67

Target	Alias	Description	ECC score	Gene Family Method
98831	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
A4A49_32573	No alias	ap2-like ethylene-responsive transcription factor	0.03	Orthogroups_2024-Update
A4A49_34987	No alias	ap2-like ethylene-responsive transcription factor ant	0.01	Orthogroups_2024-Update
At1g16060	No alias	AP2-like ethylene-responsive transcription factor...	0.04	Orthogroups_2024-Update
At2g28550	No alias	Related to AP2.7 [Source:UniProtKB/TrEMBL;Acc:F4IIR3]	0.03	Orthogroups_2024-Update
Bradi1g53650	No alias	related to AP2.7	0.03	Orthogroups_2024-Update
Bradi2g26987	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Bradi3g36820	No alias	ARIA-interacting double AP2 domain protein	0.03	Orthogroups_2024-Update
Brara.B01045.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.03	Orthogroups_2024-Update
Brara.F01116.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.03	Orthogroups_2024-Update
Brara.G01191.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.04	Orthogroups_2024-Update
GRMZM2G141219	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.01G188400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G091200	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.07G021000	No alias	ARIA-interacting double AP2 domain protein	0.03	Orthogroups_2024-Update
Glyma.08G227700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G011800.24	No alias	AP2-type transcription factor *(WRI/AIL)	0.02	Orthogroups_2024-Update
HORVU1Hr1G056500.15	No alias	AP2-type transcription factor *(WRI/AIL)	0.02	Orthogroups_2024-Update
HORVU2Hr1G113880.23	No alias	AP2-type transcription factor *(WRI/AIL)	0.05	Orthogroups_2024-Update
Kfl00280_0010	kfl00280_0010_v1.1	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
MA_2193g0020	No alias	(at4g36920 : 276.0) Encodes a floral homeotic gene, a...	0.04	Orthogroups_2024-Update
MA_30905g0010	No alias	(at3g54320 : 256.0) WRINKLED1 encodes transcription...	0.02	Orthogroups_2024-Update
PSME_00035547-RA	No alias	(at4g36920 : 332.0) Encodes a floral homeotic gene, a...	0.03	Orthogroups_2024-Update
PSME_00036178-RA	No alias	(at4g18520 : 129.0) Pentatricopeptide repeat (PPR)...	0.02	Orthogroups_2024-Update
Potri.001G041500	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.003G205700	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Potri.007G007400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.014G012200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.016G084500	No alias	related to AP2.7	0.04	Orthogroups_2024-Update
Pp1s131_131V6	No alias	ap2 domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.3G165200.1	No alias	AP2-type transcription factor *(WRI/AIL) &...	0.03	Orthogroups_2024-Update
Seita.5G356300.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.02	Orthogroups_2024-Update
Solyc06g075510	No alias	APETALA2e	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Predicted GO
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEP	Predicted GO
MF	GO:0004096	catalase activity	IEP	Predicted GO
MF	GO:0004347	glucose-6-phosphate isomerase activity	IEP	Predicted GO
MF	GO:0004476	mannose-6-phosphate isomerase activity	IEP	Predicted GO
MF	GO:0004601	peroxidase activity	IEP	Predicted GO
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Predicted GO
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	Predicted GO
MF	GO:0004664	prephenate dehydratase activity	IEP	Predicted GO
BP	GO:0005996	monosaccharide metabolic process	IEP	Predicted GO
BP	GO:0006006	glucose metabolic process	IEP	Predicted GO
BP	GO:0006082	organic acid metabolic process	IEP	Predicted GO
BP	GO:0006094	gluconeogenesis	IEP	Predicted GO
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predicted GO
BP	GO:0006555	methionine metabolic process	IEP	Predicted GO
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Predicted GO
BP	GO:0006790	sulfur compound metabolic process	IEP	Predicted GO
MF	GO:0008172	S-methyltransferase activity	IEP	Predicted GO
MF	GO:0008200	ion channel inhibitor activity	IEP	Predicted GO
MF	GO:0008270	zinc ion binding	IEP	Predicted GO
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009086	methionine biosynthetic process	IEP	Predicted GO
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	Predicted GO
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Predicted GO
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Predicted GO
BP	GO:0016053	organic acid biosynthetic process	IEP	Predicted GO
MF	GO:0016209	antioxidant activity	IEP	Predicted GO
MF	GO:0016247	channel regulator activity	IEP	Predicted GO
MF	GO:0016248	channel inhibitor activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predicted GO
MF	GO:0016853	isomerase activity	IEP	Predicted GO
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Predicted GO
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Predicted GO
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Predicted GO
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predicted GO
MF	GO:0017080	sodium channel regulator activity	IEP	Predicted GO
BP	GO:0019318	hexose metabolic process	IEP	Predicted GO
BP	GO:0019319	hexose biosynthetic process	IEP	Predicted GO
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predicted GO
MF	GO:0019871	sodium channel inhibitor activity	IEP	Predicted GO
CC	GO:0031012	extracellular matrix	IEP	Predicted GO
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Predicted GO
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
BP	GO:0043436	oxoacid metabolic process	IEP	Predicted GO
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Predicted GO
BP	GO:0044281	small molecule metabolic process	IEP	Predicted GO
BP	GO:0044283	small molecule biosynthetic process	IEP	Predicted GO
CC	GO:0044421	extracellular region part	IEP	Predicted GO
BP	GO:0046364	monosaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Predicted GO
MF	GO:0051287	NAD binding	IEP	Predicted GO
MF	GO:0099106	ion channel regulator activity	IEP	Predicted GO
BP	GO:1901576	organic substance biosynthetic process	IEP	Predicted GO
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Predicted GO
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Predicted GO
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Predicted GO
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	136	184

External Links

No external refs found!

Brara.J01371.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation