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  5. Brara.J01419.1

Brara.J01419.1


Description : plasma membrane intrinsic protein *(PIP)


Gene families : OG_42_0000132 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J01419.1
Cluster HCAA Clusters: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
A4A49_26806 No alias aquaporin pip2-1 0.03 Orthogroups_2024-Update
Bradi1g28760 No alias plasma membrane intrinsic protein 2A 0.02 Orthogroups_2024-Update
Brara.H01161.1 No alias plasma membrane intrinsic protein *(PIP) 0.03 Orthogroups_2024-Update
Glyma.11G023200 No alias plasma membrane intrinsic protein 1;4 0.03 Orthogroups_2024-Update
Glyma.16G155000 No alias plasma membrane intrinsic protein 2 0.04 Orthogroups_2024-Update
HORVU2Hr1G038740.1 No alias plasma membrane intrinsic protein *(PIP) 0.02 Orthogroups_2024-Update
LOC_Os09g36930 No alias aquaporin protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00012113-RA No alias (at2g16850 : 359.0) plasma membrane intrinsic protein... 0.03 Orthogroups_2024-Update
Potri.010G222700 No alias plasma membrane intrinsic protein 2;5 0.03 Orthogroups_2024-Update
Seita.1G372300.1 No alias plasma membrane intrinsic protein *(PIP) 0.02 Orthogroups_2024-Update
Seita.2G291500.1 No alias plasma membrane intrinsic protein *(PIP) 0.02 Orthogroups_2024-Update
Sopen09g002620 No alias Major intrinsic protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 33 266
No external refs found!