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  5. Brara.J01422.1

Brara.J01422.1


Description : HD-ZIP III-type transcription factor


Gene families : OG_42_0000541 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000541_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J01422.1
Cluster HCAA Clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
270225 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.02 Orthogroups_2024-Update
A4A49_29019 No alias homeobox-leucine zipper protein athb-15 0.02 Orthogroups_2024-Update
Brara.F00211.1 No alias HD-ZIP III-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.04G085000 No alias homeobox gene 8 0.03 Orthogroups_2024-Update
MA_19520g0020 No alias (at1g52150 : 1125.0) Member of the class III HD-ZIP... 0.03 Orthogroups_2024-Update
PSME_00022063-RA No alias (at2g34710 : 99.4) Dominant PHB mutations cause... 0.03 Orthogroups_2024-Update
Potri.011G098300 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.03 Orthogroups_2024-Update
Pp1s55_99V6 No alias homeodomain-leucine zipper trancription factor hb-3 0.02 Orthogroups_2024-Update
Sobic.001G157400.1 No alias HD-ZIP III-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G537300.2 No alias HD-ZIP III-type transcription factor & transcriptional... 0.01 Orthogroups_2024-Update
Sopen02g006800 No alias MEKHLA domain 0.03 Orthogroups_2024-Update
Sopen03g039740 No alias MEKHLA domain 0.03 Orthogroups_2024-Update
Sopen11g028190 No alias MEKHLA domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0008289 lipid binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 25 83
IPR002913 START_lipid-bd_dom 162 368
IPR013978 MEKHLA 695 849
No external refs found!