1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.J01553.1

Brara.J01553.1


Description : beta-galactosidase *(BGAL7) & EC_3.2 glycosylase


Gene families : OG_42_0000109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J01553.1
Cluster HCAA Clusters: Cluster_398

Target Alias Description ECC score Gene Family Method Actions
At2g04060 No alias Glycosyl hydrolase family 35 protein... 0.04 Orthogroups_2024-Update
At4g35010 No alias Beta-galactosidase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV1] 0.04 Orthogroups_2024-Update
Bradi1g37450 No alias beta galactosidase 1 0.02 Orthogroups_2024-Update
Brara.G01582.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.K00159.1 No alias beta-galactosidase *(BGAL1) & EC_3.2 glycosylase 0.05 Orthogroups_2024-Update
GRMZM2G178106 No alias beta-galactosidase 3 0.02 Orthogroups_2024-Update
Glyma.02G070700 No alias beta-galactosidase 7 0.05 Orthogroups_2024-Update
Glyma.09G122900 No alias beta-galactosidase 7 0.03 Orthogroups_2024-Update
HORVU3Hr1G081960.9 No alias 1,2-beta-galactosidase & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
PSME_00001344-RA No alias (p45582|bgal_aspof : 301.0) Beta-galactosidase precursor... 0.03 Orthogroups_2024-Update
Potri.004G174800 No alias glycosyl hydrolase family 35 protein 0.03 Orthogroups_2024-Update
Potri.006G144500 No alias beta galactosidase 1 0.03 Orthogroups_2024-Update
Sobic.002G279900.1 No alias beta-galactosidase *(MUM2) & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Solyc01g111540 No alias Beta-galactosidase (AHRD V3.3 *** M1A6P4_SOLTU) 0.02 Orthogroups_2024-Update
Solyc03g121540 No alias beta-galactosidase 3 0.03 Orthogroups_2024-Update
Solyc07g042220 No alias Beta-galactosidase (AHRD V3.3 *** A0A022QEX1_ERYGU) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR025300 BetaGal_jelly_roll_dom 465 544
IPR000922 Lectin_gal-bd_dom 750 829
IPR031330 Gly_Hdrlase_35_cat 34 337
No external refs found!