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  5. Brara.J01575.1

Brara.J01575.1


Description : calcium sensor *(CBL)


Gene families : OG_42_0000326 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000326_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J01575.1
Cluster HCAA Clusters: Cluster_297

Target Alias Description ECC score Gene Family Method Actions
Brara.I00577.1 No alias calcium-dependent SOS2 activator SOS3 & calcium sensor *(CBL) 0.03 Orthogroups_2024-Update
Glyma.04G235900 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Seita.1G130300.1 No alias calcium-dependent SOS2 activator SOS3 & calcium sensor *(CBL) 0.03 Orthogroups_2024-Update
Sopen03g023070 No alias EF-hand domain pair 0.03 Orthogroups_2024-Update
Sopen08g018900 No alias EF-hand domain pair 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 108 177
No external refs found!