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  5. Brara.J01629.1

Brara.J01629.1


Description : RopGEF guanine nucleotide exchange factor *(PRONE)


Gene families : OG_42_0000202 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J01629.1
Cluster HCAA Clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
A4A49_26929 No alias rop guanine nucleotide exchange factor 12 0.03 Orthogroups_2024-Update
Bradi4g36910 No alias rho guanyl-nucleotide exchange factor 1 0.03 Orthogroups_2024-Update
Brara.F00204.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.04 Orthogroups_2024-Update
Glyma.03G013500 No alias RHO guanyl-nucleotide exchange factor 3 0.08 Orthogroups_2024-Update
LOC_Os02g47420 No alias ATROPGEF7/ROPGEF7, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g38000 No alias ATROPGEF7/ROPGEF7, putative, expressed 0.02 Orthogroups_2024-Update
Seita.3G221100.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.04 Orthogroups_2024-Update
Solyc08g075120 No alias Rop guanine nucleotide exchange factor, putative (AHRD... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005512 PRONE_dom 65 417
No external refs found!