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  5. Brara.J01702.1

Brara.J01702.1


Description : TUB-type transcription factor


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J01702.1
Cluster HCAA Clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Bradi3g13080 No alias tubby like protein 10 0.02 Orthogroups_2024-Update
HORVU6Hr1G068970.3 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os03g22800 No alias OsFBT5 - F-box and tubby domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g48670 No alias OsFBT10 - F-box and tubby domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_132704g0010 No alias (at2g47900 : 535.0) Member of TLP family; tubby like... 0.04 Orthogroups_2024-Update
MA_87289g0010 No alias (at2g47900 : 157.0) Member of TLP family; tubby like... 0.02 Orthogroups_2024-Update
PSME_00035615-RA No alias (at2g47900 : 306.0) Member of TLP family; tubby like... 0.03 Orthogroups_2024-Update
Pp1s222_25V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.7G293600.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G372000.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Solyc04g071440 No alias Tubby-like F-box protein (AHRD V3.3 *** K4BTD6_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 38 78
IPR000007 Tubby_C 100 393
No external refs found!