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  5. Brara.J01778.1

Brara.J01778.1


Description : MYB class-R2R3 subgroup-21 transcription factor


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J01778.1
Cluster HCAA Clusters: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
At3g29020 No alias Myb domain protein 110 [Source:UniProtKB/TrEMBL;Acc:F4J1R5] 0.03 Orthogroups_2024-Update
At5g39700 No alias Myb domain protein 89 [Source:UniProtKB/TrEMBL;Acc:Q9SPG4] 0.04 Orthogroups_2024-Update
Brara.G02889.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G121570 No alias myb domain protein 119 0.03 Orthogroups_2024-Update
Glyma.02G253100 No alias myb domain protein 109 0.04 Orthogroups_2024-Update
Glyma.14G086500 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Glyma.14G192600 No alias myb domain protein 64 0.03 Orthogroups_2024-Update
Glyma.19G118500 No alias myb domain protein 117 0.04 Orthogroups_2024-Update
HORVU5Hr1G049880.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g09480 No alias myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os06g06740 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
Mp8g11870.1 No alias transcription factor (MYB) 0.02 Orthogroups_2024-Update
PSME_00015260-RA No alias (at1g22640 : 149.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
Pp1s219_84V6 No alias F24J1.31; myb family transcription factor (MYB105)... 0.03 Orthogroups_2024-Update
Solyc05g007870 No alias R2R3MYB transcription factor 117 0.03 Orthogroups_2024-Update
evm.model.tig00000448.26 No alias (at3g27785 : 103.0) putative transcription factor... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 83 129
IPR001005 SANT/Myb 135 178
No external refs found!