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  5. Brara.J01871.1

Brara.J01871.1


Description : MYB class-R2R3 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J01871.1
Cluster HCAA Clusters: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
A4A49_12286 No alias transcription factor myb30 0.02 Orthogroups_2024-Update
A4A49_13170 No alias transcription factor myb36 0.03 Orthogroups_2024-Update
At3g12720 No alias AT3g12720/MBK21_8 [Source:UniProtKB/TrEMBL;Acc:Q9LTW2] 0.03 Orthogroups_2024-Update
At3g13890 No alias Transcription factor MYB26... 0.03 Orthogroups_2024-Update
At4g01680 No alias Myb domain protein 55 [Source:UniProtKB/TrEMBL;Acc:Q9ZSI4] 0.03 Orthogroups_2024-Update
At5g62470 No alias Transcription factor MYB96... 0.04 Orthogroups_2024-Update
Bradi4g22637 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Bradi4g29796 No alias myb domain protein 20 0.03 Orthogroups_2024-Update
Bradi5g15760 No alias myb domain protein 15 0.05 Orthogroups_2024-Update
Bradi5g20130 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
Brara.C02447.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
Brara.I00102.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G115859 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.02G009800 No alias myb domain protein 2 0.03 Orthogroups_2024-Update
Glyma.04G004100 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.07G228600 No alias myb domain protein 16 0.03 Orthogroups_2024-Update
Glyma.13G303200 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Glyma.19G222200 No alias myb domain protein 55 0.03 Orthogroups_2024-Update
HORVU4Hr1G054420.3 No alias MYB class-R2R3 subgroup-7 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g18240 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g36460 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g42950 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10434028g0010 No alias (at1g68320 : 180.0) putative transcription factor:... 0.02 Orthogroups_2024-Update
MA_19163g0010 No alias (p20026|myb1_horvu : 256.0) Myb-related protein Hv1 -... 0.03 Orthogroups_2024-Update
MA_33964g0010 No alias (at5g16600 : 262.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
MA_8147g0020 No alias (at1g22640 : 206.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
Mp3g23170.1 No alias transcription factor (MYB) 0.02 Orthogroups_2024-Update
PSME_00014669-RA No alias (at1g22640 : 190.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00021444-RA No alias (at1g22640 : 170.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00041506-RA No alias "(at2g47460 : 179.0) ""MYB12 belongs to subgroup 7 of... 0.03 Orthogroups_2024-Update
PSME_00041772-RA No alias (at5g15310 : 261.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00041780-RA No alias (at4g38620 : 265.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
PSME_00052883-RA No alias (p20026|myb1_horvu : 239.0) Myb-related protein Hv1 -... 0.03 Orthogroups_2024-Update
PSME_00053156-RA No alias (at1g48000 : 177.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
Potri.002G173900 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Potri.003G155700 No alias myb domain protein 67 0.02 Orthogroups_2024-Update
Potri.013G148600 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Potri.013G149200 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Seita.3G350800.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Seita.4G086300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G244100.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G303600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.03 Orthogroups_2024-Update
Sobic.007G178300.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Solyc11g073120 No alias R2R3MYB transcription factor 58 0.03 Orthogroups_2024-Update
Sopen01g034190 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen02g016480 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 71 111
No external refs found!