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  5. Brara.J01927.1

Brara.J01927.1


Description : floral promoter *(CONSTANS) & BBX class-I transcription factor


Gene families : OG_42_0000725 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000725_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J01927.1
Cluster HCAA Clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Bradi1g31280 No alias CONSTANS-like 4 0.03 Orthogroups_2024-Update
Bradi3g05800 No alias CONSTANS-like 3 0.02 Orthogroups_2024-Update
Brara.D01502.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.05 Orthogroups_2024-Update
Cre16.g675100 No alias CONSTANS-like 2 0.02 Orthogroups_2024-Update
HORVU5Hr1G051230.1 No alias floral promoter *(CONSTANS) 0.03 Orthogroups_2024-Update
LOC_Os04g42020 No alias CCT/B-box zinc finger protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g06464 No alias CCT/B-box zinc finger protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00015948-RA No alias (at5g24930 : 259.0) CONSTANS-like 4 (COL4); FUNCTIONS... 0.03 Orthogroups_2024-Update
Sobic.006G135100.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 61 106
IPR010402 CCT_domain 294 335
No external refs found!