1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.J02153.1

Brara.J02153.1


Description : PHD finger transcription factor & component *(DDP) of ISWI chromatin remodeling complex


Gene families : OG_42_0001571 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001571_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J02153.1
Cluster HCAA Clusters: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
Cre05.g247000 No alias DNA binding;zinc ion binding;DNA binding 0.02 Orthogroups_2024-Update
evm.model.tig00000113.21 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR018501 DDT_dom 670 721
IPR019787 Znf_PHD-finger 827 870
No external refs found!