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Description : Unknown function
Gene families : OG_42_0004930 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004930_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.J02162.1 | |
| Cluster | HCAA Clusters: Cluster_315 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Glyma.20G037400 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G108930.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| LOC_Os01g72480 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| Seita.5G456300.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046872 | metal ion binding | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000976 | transcription regulatory region sequence-specific DNA binding | IEP | Predicted GO |
| MF | GO:0000977 | RNA polymerase II regulatory region sequence-specific DNA binding | IEP | Predicted GO |
| MF | GO:0001012 | RNA polymerase II regulatory region DNA binding | IEP | Predicted GO |
| MF | GO:0001067 | regulatory region nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
| MF | GO:0003917 | DNA topoisomerase type I activity | IEP | Predicted GO |
| CC | GO:0005778 | peroxisomal membrane | IEP | Predicted GO |
| BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
| BP | GO:0006996 | organelle organization | IEP | Predicted GO |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Predicted GO |
| BP | GO:0016559 | peroxisome fission | IEP | Predicted GO |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Predicted GO |
| MF | GO:0016759 | cellulose synthase activity | IEP | Predicted GO |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Predicted GO |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predicted GO |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Predicted GO |
| BP | GO:0030243 | cellulose metabolic process | IEP | Predicted GO |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Predicted GO |
| CC | GO:0031903 | microbody membrane | IEP | Predicted GO |
| MF | GO:0032422 | purine-rich negative regulatory element binding | IEP | Predicted GO |
| CC | GO:0042579 | microbody | IEP | Predicted GO |
| MF | GO:0043531 | ADP binding | IEP | Predicted GO |
| MF | GO:0044212 | transcription regulatory region DNA binding | IEP | Predicted GO |
| CC | GO:0044438 | microbody part | IEP | Predicted GO |
| CC | GO:0044439 | peroxisomal part | IEP | Predicted GO |
| BP | GO:0048285 | organelle fission | IEP | Predicted GO |
| BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
| CC | GO:0098805 | whole membrane | IEP | Predicted GO |
| MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018957 | Znf_C3HC4_RING-type | 44 | 86 |
| No external refs found! |