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  5. Brara.J02169.1

Brara.J02169.1


Description : subunit beta of RAB-GTPase geranylgeranyltransferase (RGT) complex


Gene families : OG_42_0004916 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004916_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J02169.1
Cluster HCAA Clusters: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
Pp1s163_87V6 No alias geranylgeranyl transferase type ii beta 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001330 PFTB_repeat 63 102
IPR001330 PFTB_repeat 110 151
IPR001330 PFTB_repeat 157 200
IPR001330 PFTB_repeat 206 248
IPR001330 PFTB_repeat 253 296
No external refs found!