Brara.J02216.1

Description : subgroup ERF-III transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.J02216.1
Cluster	HCAA Clusters: Cluster_134

Target	Alias	Description	ECC score	Gene Family Method
A4A49_07545	No alias	pathogenesis-related genes transcriptional activator pti6	0.03	Orthogroups_2024-Update
A4A49_15089	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
A4A49_21212	No alias	ethylene-responsive transcription factor erf008	0.02	Orthogroups_2024-Update
A4A49_30738	No alias	ethylene-responsive transcription factor abr1	0.03	Orthogroups_2024-Update
A4A49_39586	No alias	ethylene-responsive transcription factor erf106	0.03	Orthogroups_2024-Update
AC198403.3_FG001	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi2g11890	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Brara.C03783.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.D02156.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Brara.H00930.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.H02645.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.I00546.1	No alias	cutin and suberin biosynthesis transcription factor...	0.03	Orthogroups_2024-Update
Glyma.11G239200	No alias	related to AP2 4	0.03	Orthogroups_2024-Update
Glyma.15G095600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
LOC_Os02g54160	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g46440	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g55520	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_288689g0010	No alias	(at1g01250 : 120.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00034201-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00037661-RA	No alias	(at4g17500 : 149.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00056197-RA	No alias	(at5g67190 : 143.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Potri.005G195000	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.014G099900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s127_75V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s132_34V6	No alias	transcriptional factor	0.03	Orthogroups_2024-Update
Pp1s14_196V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Pp1s276_72V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s296_32V6	No alias	transcriptional factor	0.03	Orthogroups_2024-Update
Pp1s41_212V6	No alias	ap2 erf domain-containing transcription factor	0.04	Orthogroups_2024-Update
Pp1s480_12V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Pp1s64_47V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s67_144V6	No alias	ap2 domain transcription factor	0.03	Orthogroups_2024-Update
Seita.3G021800.1	No alias	subgroup ERF-V transcription factor	0.03	Orthogroups_2024-Update
Seita.3G272600.1	No alias	transcription factor component *(HRE/RAP2.12) of...	0.03	Orthogroups_2024-Update
Seita.5G320400.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G227400.2	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Sobic.010G071700.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Sobic.010G080400.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc11g012980	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc12g056590	No alias	Ethylene Response Factor D.2	0.02	Orthogroups_2024-Update
Sopen03g024350	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen07g024840	No alias	AP2 domain	0.02	Orthogroups_2024-Update
evm.model.tig00000093.224	No alias	no hits & (original description: no original description)	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003697	single-stranded DNA binding	IEP	Predicted GO
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006098	pentose-phosphate shunt	IEP	Predicted GO
BP	GO:0006739	NADP metabolic process	IEP	Predicted GO
BP	GO:0010215	cellulose microfibril organization	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predicted GO
BP	GO:0030198	extracellular matrix organization	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0032182	ubiquitin-like protein binding	IEP	Predicted GO
BP	GO:0043062	extracellular structure organization	IEP	Predicted GO
MF	GO:0043130	ubiquitin binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
MF	GO:0050662	coenzyme binding	IEP	Predicted GO
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	Predicted GO
BP	GO:0051186	cofactor metabolic process	IEP	Predicted GO
MF	GO:0071949	FAD binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	60	110

External Links

No external refs found!

Brara.J02216.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation