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  5. Brara.J02240.1

Brara.J02240.1


Description : abscisic acid perception modulator *(SOAR)


Gene families : OG_42_0009807 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009807_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J02240.1
Cluster HCAA Clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Sobic.010G249900.2 No alias abscisic acid perception modulator *(SOAR) 0.04 Orthogroups_2024-Update
Sopen06g024170 No alias PPR repeat family 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 313 335
IPR002885 Pentatricopeptide_repeat 171 193
IPR002885 Pentatricopeptide_repeat 134 154
IPR002885 Pentatricopeptide_repeat 238 287
IPR002885 Pentatricopeptide_repeat 343 387
IPR002885 Pentatricopeptide_repeat 413 462
No external refs found!