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  5. Brara.J02361.1

Brara.J02361.1


Description : actin filament protein


Gene families : OG_42_0000262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J02361.1
Cluster HCAA Clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Bradi1g10630 No alias actin-11 0.04 Orthogroups_2024-Update
Brara.B00330.1 No alias actin filament protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G074350.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G008310.9 No alias actin filament protein 0.02 Orthogroups_2024-Update
Kfl00726_0080 kfl00726_0080_v1.... (at3g12110 : 635.0) Encodes an actin that is expressed... 0.01 Orthogroups_2024-Update
LOC_Os01g73310 No alias actin, putative, expressed 0.02 Orthogroups_2024-Update
Mp6g11010.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
PSME_00002140-RA No alias (o81221|act_goshi : 745.0) Actin - Gossypium hirsutum... 0.02 Orthogroups_2024-Update
PSME_00011258-RA No alias (o81221|act_goshi : 662.0) Actin - Gossypium hirsutum... 0.03 Orthogroups_2024-Update
PSME_00011991-RA No alias (o81221|act_goshi : 743.0) Actin - Gossypium hirsutum... 0.02 Orthogroups_2024-Update
Potri.001G453600 No alias actin 7 0.03 Orthogroups_2024-Update
Pp1s337_21V6 No alias No description available 0.02 Orthogroups_2024-Update
Sopen03g021220 No alias Actin 0.03 Orthogroups_2024-Update
evm.model.contig_3739.1 No alias (p53498|act_chlre : 579.0) Actin - Chlamydomonas... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0009555 pollen development IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
BP GO:0048229 gametophyte development IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!