1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.J02367.1

Brara.J02367.1


Description : bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase *(BXL) & EC_3.2 glycosylase


Gene families : OG_42_0000397 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J02367.1
Cluster HCAA Clusters: Cluster_402

Target Alias Description ECC score Gene Family Method Actions
A4A49_38116 No alias putative beta-d-xylosidase 2 0.02 Orthogroups_2024-Update
Bradi4g20197 No alias Glycosyl hydrolase family protein 0.02 Orthogroups_2024-Update
Brara.E02235.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.04 Orthogroups_2024-Update
GRMZM2G035503 No alias Glycosyl hydrolase family protein 0.02 Orthogroups_2024-Update
Glyma.15G143700 No alias beta-xylosidase 1 0.02 Orthogroups_2024-Update
LOC_Os11g19210 No alias beta-D-xylosidase, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00023182-RA No alias (at5g10560 : 365.0) Glycosyl hydrolase family protein;... 0.04 Orthogroups_2024-Update
Potri.002G197200 No alias beta-xylosidase 2 0.04 Orthogroups_2024-Update
Seita.1G323200.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
Sopen10g016980 No alias Glycosyl hydrolase family 3 N terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 410 639
IPR001764 Glyco_hydro_3_N 122 363
IPR026891 Fn3-like 698 765
No external refs found!