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  5. Brara.J02450.1

Brara.J02450.1


Description : Unknown function


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J02450.1
Cluster HCAA Clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
At3g13228 No alias RING/U-box superfamily protein... 0.03 Orthogroups_2024-Update
At3g56580 No alias E3 ubiquitin-protein ligase RZF1... 0.04 Orthogroups_2024-Update
Bradi3g38870 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g15190 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.I04047.1 No alias Unknown function 0.05 Orthogroups_2024-Update
GRMZM2G049346 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G122848 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G285300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G019650.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os11g05230 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.001G231000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.015G028400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Seita.2G401300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G253600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G403200.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc01g009000 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G56580.3) 0.03 Orthogroups_2024-Update
Sopen08g021220 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0045048 protein insertion into ER membrane IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
BP GO:0051205 protein insertion into membrane IEP Predicted GO
BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 311 352
No external refs found!