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  5. Brara.J02471.1

Brara.J02471.1


Description : group-II formin actin filament elongation factor


Gene families : OG_42_0000436 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000436_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J02471.1
Cluster HCAA Clusters: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
At1g42980 No alias Formin-like protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7S1] 0.04 Orthogroups_2024-Update
At5g07770 No alias Actin-binding FH2 protein [Source:TAIR;Acc:AT5G07770] 0.04 Orthogroups_2024-Update
Brara.I02711.1 No alias group-II formin actin filament elongation factor 0.03 Orthogroups_2024-Update
Kfl00111_0310 kfl00111_0310_v1.1 (at1g31810 : 372.0) Encodes the Type II Arabidopsis... 0.02 Orthogroups_2024-Update
LOC_Os07g40510 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g02980 No alias formin, putative, expressed 0.02 Orthogroups_2024-Update
Sobic.008G141100.1 No alias group-II formin actin filament elongation factor 0.03 Orthogroups_2024-Update
evm.model.tig00021522.18 No alias (at5g07740 : 124.0) actin binding; FUNCTIONS IN: actin... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0004061 arylformamidase activity IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006569 tryptophan catabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0006658 phosphatidylserine metabolic process IEP Predicted GO
BP GO:0006659 phosphatidylserine biosynthetic process IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009074 aromatic amino acid family catabolic process IEP Predicted GO
BP GO:0009310 amine catabolic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0042180 cellular ketone metabolic process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042402 cellular biogenic amine catabolic process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0042436 indole-containing compound catabolic process IEP Predicted GO
BP GO:0042537 benzene-containing compound metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0046218 indolalkylamine catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0070189 kynurenine metabolic process IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR014020 Tensin_C2-dom 196 333
IPR015425 FH2_Formin 793 1164
No external refs found!