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  5. Brara.J02487.1

Brara.J02487.1


Description : regulatory factor SNX2 of Retromer protein recycling complex


Gene families : OG_42_0003015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J02487.1
Cluster HCAA Clusters: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
A4A49_23396 No alias sorting nexin 2b 0.03 Orthogroups_2024-Update
LOC_Os01g61150 No alias phox domain-containing protein, putative, expressed 0.03 Orthogroups_2024-Update
Seita.3G280900.1 No alias regulatory factor SNX2 of Retromer protein recycling complex 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0010257 NADH dehydrogenase complex assembly IEP Predicted GO
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR015404 Vps5_C 297 528
IPR001683 Phox 152 232
No external refs found!