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  5. Brara.J02499.1

Brara.J02499.1


Description : protease *(RBL)


Gene families : OG_42_0000533 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000533_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J02499.1
Cluster HCAA Clusters: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
At1g52580 No alias RHOMBOID-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSR0] 0.04 Orthogroups_2024-Update
At1g77860 No alias Rhomboid-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178W8L8] 0.03 Orthogroups_2024-Update
At5g07250 No alias Rhomboid-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178UBV1] 0.03 Orthogroups_2024-Update
Brara.A01321.1 No alias protease *(RBL) 0.03 Orthogroups_2024-Update
Glyma.07G132800 No alias RHOMBOID-like 1 0.04 Orthogroups_2024-Update
Glyma.18G181800 No alias RHOMBOID-like 1 0.04 Orthogroups_2024-Update
Potri.001G241300 No alias RHOMBOID-like 1 0.05 Orthogroups_2024-Update
Potri.002G090400 No alias Rhomboid-related intramembrane serine protease family protein 0.03 Orthogroups_2024-Update
Pp1s156_70V6 No alias membrane protein 0.03 Orthogroups_2024-Update
Pp1s84_202V6 No alias membrane protein 0.03 Orthogroups_2024-Update
Seita.9G349500.1 No alias protease *(RBL) 0.02 Orthogroups_2024-Update
Sobic.001G321800.1 No alias protease *(RBL) 0.03 Orthogroups_2024-Update
Sopen03g004920 No alias Rhomboid family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 129 271
No external refs found!