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Brara.J02540.1


Description : pathogen polygalacturonase inhibitor *(PGIP)


Gene families : OG_42_0000642 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J02540.1
Cluster HCAA Clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
At5g06860 No alias PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4] 0.05 Orthogroups_2024-Update
Seita.3G071600.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.03 Orthogroups_2024-Update
Sopen09g007290 No alias Leucine rich repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 32 68
IPR001611 Leu-rich_rpt 126 184
No external refs found!