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  5. Brara.J02547.1

Brara.J02547.1


Description : GARP subgroup PHL transcription factor


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J02547.1
Cluster HCAA Clusters: Cluster_363

Target Alias Description ECC score Gene Family Method Actions
149357 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
442062 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
A4A49_24131 No alias myb family transcription factor phl8 0.03 Orthogroups_2024-Update
Bradi1g14480 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g18590 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Bradi5g25320 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.A00897.1 No alias KANADI-type transcription factor 0.03 Orthogroups_2024-Update
Brara.E00559.1 No alias transcription factor *(CLAUSA) 0.04 Orthogroups_2024-Update
Brara.G03665.1 No alias regulatory protein *(FE) of florigen biosynthesis & GARP... 0.03 Orthogroups_2024-Update
Glyma.13G290100 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G054350.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G080530.10 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
LOC_Os04g56990 No alias Myb-like DNA-binding domain containing protein,... 0.03 Orthogroups_2024-Update
PSME_00040944-RA No alias (at3g04030 : 275.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
Pp1s166_69V6 No alias No description available 0.02 Orthogroups_2024-Update
Pp1s55_182V6 No alias T3G21.3; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.3G199300.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Seita.8G019800.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
Sobic.002G121600.1 No alias GARP subgroup PHL transcription factor & transcription... 0.03 Orthogroups_2024-Update
Solyc05g007890 No alias Myb family transcription factor APL (AHRD V3.3 *** W9SPH9_9ROSA) 0.03 Orthogroups_2024-Update
Solyc06g066180 No alias Myb family transcription factor family protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc08g076400 No alias Myb family transcription factor family protein (AHRD... 0.04 Orthogroups_2024-Update
Solyc09g005040 No alias No description available 0.05 Orthogroups_2024-Update
Sopen05g034340 No alias MYB-CC type transfactor, LHEQLE motif 0.02 Orthogroups_2024-Update
Sopen08g024980 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0007265 Ras protein signal transduction IEP Predicted GO
BP GO:0007266 Rho protein signal transduction IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 280 326
IPR001005 SANT/Myb 201 250
No external refs found!