- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : cytokinin phosphoribohydrolase *(LOG)
Gene families : OG_42_0000308 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000308_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.J02589.1 | |
| Cluster | HCAA Clusters: Cluster_306 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At5g26140 | No alias | Putative lysine decarboxylase family protein... | 0.03 | Orthogroups_2024-Update | |
| Cre07.g340900 | No alias | Putative lysine decarboxylase family protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G019363 | No alias | Putative lysine decarboxylase family protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM5G879665 | No alias | lysine decarboxylase family protein | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001101 | response to acid chemical | IEP | Predicted GO |
| MF | GO:0003677 | DNA binding | IEP | Predicted GO |
| MF | GO:0004177 | aminopeptidase activity | IEP | Predicted GO |
| MF | GO:0004664 | prephenate dehydratase activity | IEP | Predicted GO |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Predicted GO |
| CC | GO:0005634 | nucleus | IEP | Predicted GO |
| BP | GO:0006558 | L-phenylalanine metabolic process | IEP | Predicted GO |
| BP | GO:0007034 | vacuolar transport | IEP | Predicted GO |
| MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | Predicted GO |
| BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Predicted GO |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Predicted GO |
| BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | Predicted GO |
| BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Predicted GO |
| BP | GO:0010035 | response to inorganic substance | IEP | Predicted GO |
| BP | GO:0010167 | response to nitrate | IEP | Predicted GO |
| BP | GO:0015698 | inorganic anion transport | IEP | Predicted GO |
| BP | GO:0015706 | nitrate transport | IEP | Predicted GO |
| MF | GO:0030145 | manganese ion binding | IEP | Predicted GO |
| BP | GO:0042221 | response to chemical | IEP | Predicted GO |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
| MF | GO:0070006 | metalloaminopeptidase activity | IEP | Predicted GO |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
| BP | GO:1901698 | response to nitrogen compound | IEP | Predicted GO |
| BP | GO:1901700 | response to oxygen-containing compound | IEP | Predicted GO |
| BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR031100 | LOG_fam | 53 | 130 |
| No external refs found! |