Brara.J02603.1

Description : component *(uS11) of small ribosomal-subunit (SSU) proteome

Gene families : OG_42_0001574 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001574_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.J02603.1
Cluster	HCAA Clusters: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
183051	No alias	Ribosomal protein S11 family protein	0.15	Orthogroups_2024-Update
At3g52580	No alias	40S ribosomal protein S14-3...	0.07	Orthogroups_2024-Update
Bradi1g32830	No alias	Ribosomal protein S11 family protein	0.2	Orthogroups_2024-Update
Bradi3g04790	No alias	Ribosomal protein S11 family protein	0.2	Orthogroups_2024-Update
Brara.C03369.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.13	Orthogroups_2024-Update
Brara.D02197.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.12	Orthogroups_2024-Update
Brara.E02925.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.12	Orthogroups_2024-Update
Brara.I03565.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
Cre11.g480150	No alias	Ribosomal protein S11 family protein	0.16	Orthogroups_2024-Update
GRMZM2G069762	No alias	Ribosomal protein S11 family protein	0.13	Orthogroups_2024-Update
GRMZM2G100462	No alias	Ribosomal protein S11 family protein	0.03	Orthogroups_2024-Update
GRMZM2G120432	No alias	Ribosomal protein S11 family protein	0.08	Orthogroups_2024-Update
Glyma.03G241100	No alias	Ribosomal protein S11 family protein	0.04	Orthogroups_2024-Update
Glyma.03G241300	No alias	Ribosomal protein S11 family protein	0.1	Orthogroups_2024-Update
Glyma.13G217200	No alias	Ribosomal protein S11 family protein	0.08	Orthogroups_2024-Update
Glyma.15G095300	No alias	Ribosomal protein S11 family protein	0.08	Orthogroups_2024-Update
Glyma.19G238600	No alias	Ribosomal protein S11 family protein	0.09	Orthogroups_2024-Update
Glyma.19G238800	No alias	Ribosomal protein S11 family protein	0.1	Orthogroups_2024-Update
HORVU0Hr1G004130.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.07	Orthogroups_2024-Update
Kfl00094_0120	kfl00094_0120_v1.1	(p19951\|rs142_maize : 200.0) 40S ribosomal protein S14...	0.05	Orthogroups_2024-Update
LOC_Os02g06700	No alias	ribosomal protein, putative, expressed	0.06	Orthogroups_2024-Update
MA_113075g0010	No alias	(p19951\|rs142_maize : 223.0) 40S ribosomal protein S14...	0.08	Orthogroups_2024-Update
Mp8g03250.1	No alias	component RPS14 of SSU proteome	0.09	Orthogroups_2024-Update
Mp8g10900.1	No alias	component RPS14 of SSU proteome	0.08	Orthogroups_2024-Update
PSME_00002720-RA	No alias	(p19951\|rs142_maize : 226.0) 40S ribosomal protein S14...	0.06	Orthogroups_2024-Update
Potri.001G218700	No alias	Ribosomal protein S11 family protein	0.07	Orthogroups_2024-Update
Potri.004G131800	No alias	Ribosomal protein S11 family protein	0.06	Orthogroups_2024-Update
Potri.011G080500	No alias	Ribosomal protein S11 family protein	0.02	Orthogroups_2024-Update
Pp1s271_98V6	No alias	40s ribosomal protein	0.16	Orthogroups_2024-Update
Pp1s316_6V6	No alias	40s ribosomal protein	0.15	Orthogroups_2024-Update
Seita.1G181800.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Seita.4G260200.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.21	Orthogroups_2024-Update
Seita.7G091900.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.13	Orthogroups_2024-Update
Sobic.006G106100.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.26	Orthogroups_2024-Update
Sobic.010G205400.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.19	Orthogroups_2024-Update
Sobic.010G206200.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.18	Orthogroups_2024-Update
Solyc02g070570	No alias	30S ribosomal protein S11 (AHRD V3.3 *** A0A0K9PCU6_ZOSMR)	0.21	Orthogroups_2024-Update
Solyc09g010100	No alias	30S ribosomal protein S11 (AHRD V3.3 *** A0A0K9PVQ7_ZOSMR)	0.25	Orthogroups_2024-Update
Solyc10g083280	No alias	40S ribosomal protein S14-2	0.27	Orthogroups_2024-Update
Sopen02g019660	No alias	Ribosomal protein S11	0.22	Orthogroups_2024-Update
Sopen09g004840	No alias	Ribosomal protein S11	0.21	Orthogroups_2024-Update
Sopen10g032760	No alias	Ribosomal protein S11	0.26	Orthogroups_2024-Update
evm.model.contig_3384.21	No alias	(p46295\|rs14_chlre : 213.0) 40S ribosomal protein S14 -...	0.26	Orthogroups_2024-Update
evm.model.tig00001154.44	No alias	(p19950\|rs141_maize : 166.0) 40S ribosomal protein S14...	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001882	nucleoside binding	IEP	Predicted GO
MF	GO:0001883	purine nucleoside binding	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0003924	GTPase activity	IEP	Predicted GO
MF	GO:0003937	IMP cyclohydrolase activity	IEP	Predicted GO
MF	GO:0004018	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	IEP	Predicted GO
MF	GO:0004643	phosphoribosylaminoimidazolecarboxamide formyltransferase activity	IEP	Predicted GO
MF	GO:0004743	pyruvate kinase activity	IEP	Predicted GO
MF	GO:0005525	GTP binding	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006163	purine nucleotide metabolic process	IEP	Predicted GO
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0006188	IMP biosynthetic process	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Predicted GO
MF	GO:0008097	5S rRNA binding	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
BP	GO:0009117	nucleotide metabolic process	IEP	Predicted GO
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Predicted GO
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009165	nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009259	ribonucleotide metabolic process	IEP	Predicted GO
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	Predicted GO
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Predicted GO
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Predicted GO
MF	GO:0016842	amidine-lyase activity	IEP	Predicted GO
BP	GO:0018130	heterocycle biosynthetic process	IEP	Predicted GO
MF	GO:0019001	guanyl nucleotide binding	IEP	Predicted GO
MF	GO:0019238	cyclohydrolase activity	IEP	Predicted GO
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Predicted GO
BP	GO:0019637	organophosphate metabolic process	IEP	Predicted GO
BP	GO:0019693	ribose phosphate metabolic process	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
MF	GO:0030955	potassium ion binding	IEP	Predicted GO
MF	GO:0031420	alkali metal ion binding	IEP	Predicted GO
MF	GO:0032549	ribonucleoside binding	IEP	Predicted GO
MF	GO:0032550	purine ribonucleoside binding	IEP	Predicted GO
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0044281	small molecule metabolic process	IEP	Predicted GO
BP	GO:0046040	IMP metabolic process	IEP	Predicted GO
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	Predicted GO
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Predicted GO
BP	GO:0072521	purine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0090407	organophosphate biosynthetic process	IEP	Predicted GO
MF	GO:0097159	organic cyclic compound binding	IEP	Predicted GO
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Predicted GO
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Predicted GO
MF	GO:1901363	heterocyclic compound binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001971	Ribosomal_S11	28	146

External Links

No external refs found!

Brara.J02603.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation