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  5. Brara.J02653.1

Brara.J02653.1


Description : Trihelix-type transcription factor


Gene families : OG_42_0000967 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000967_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J02653.1
Cluster HCAA Clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
At3g58630 No alias Sequence-specific DNA binding transcription factor... 0.02 Orthogroups_2024-Update
LOC_Os01g48320 No alias transcription factor like protein, putative, expressed 0.03 Orthogroups_2024-Update
Sobic.001G405200.1 No alias Trihelix-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G094500.1 No alias Trihelix-type transcription factor 0.04 Orthogroups_2024-Update
Solyc02g076810 No alias Transcription factor (AHRD V3.3 *** A0A072VEJ2_MEDTR) 0.03 Orthogroups_2024-Update
Solyc03g122030 No alias Transcription factor (AHRD V3.3 *** G7L8C7_MEDTR) 0.04 Orthogroups_2024-Update
Sopen12g006250 No alias Myb/SANT-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!