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  5. Brara.J02683.1

Brara.J02683.1


Description : component *(MED26) of MEDIATOR transcription co-activator complex


Gene families : OG_42_0001427 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J02683.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
At5g05140 No alias Probable mediator of RNA polymerase II transcription... 0.03 Orthogroups_2024-Update
Bradi1g19810 No alias Transcription elongation factor (TFIIS) family protein 0.04 Orthogroups_2024-Update
LOC_Os03g24950 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os06g21099 No alias expressed protein 0.02 Orthogroups_2024-Update
Seita.3G241800.1 No alias component *(MED26) of MEDIATOR transcription co-activator complex 0.04 Orthogroups_2024-Update
Seita.9G394500.1 No alias component *(MED26) of MEDIATOR transcription co-activator complex 0.03 Orthogroups_2024-Update
Sobic.001G361700.1 No alias component *(MED26) of MEDIATOR transcription co-activator complex 0.02 Orthogroups_2024-Update
Sobic.002G394400.1 No alias component *(MED26) of MEDIATOR transcription co-activator complex 0.04 Orthogroups_2024-Update
Solyc10g078350 No alias Transcription elongation factor (TFIIS) family protein... 0.03 Orthogroups_2024-Update
Sopen10g031440 No alias TFIIS helical bundle-like domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0004806 triglyceride lipase activity IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0010921 regulation of phosphatase activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0019781 NEDD8 activating enzyme activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0019902 phosphatase binding IEP Predicted GO
MF GO:0019903 protein phosphatase binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0035303 regulation of dephosphorylation IEP Predicted GO
BP GO:0035304 regulation of protein dephosphorylation IEP Predicted GO
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0045116 protein neddylation IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR017923 TFIIS_N 156 204
No external refs found!