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  5. Brara.J02761.1

Brara.J02761.1


Description : membrane tethering protein (SYT1) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG_42_0000345 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000345_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J02761.1
Cluster HCAA Clusters: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
A4A49_18593 No alias synaptotagmin-3 0.03 Orthogroups_2024-Update
Brara.H03002.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.17G259000 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.04 Orthogroups_2024-Update
HORVU4Hr1G062820.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g25060 No alias NTMC2Type1.2 protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.002G150700 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.03 Orthogroups_2024-Update
Sobic.010G236100.1 No alias membrane tethering protein (SYT1) of... 0.04 Orthogroups_2024-Update
Solyc05g047710 No alias Calcium-dependent lipid-binding (CaLB domain) family... 0.03 Orthogroups_2024-Update
Solyc07g007680 No alias Calcium-dependent lipid-binding (CaLB domain) family... 0.03 Orthogroups_2024-Update
Sopen12g004680 No alias C2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 67 247
IPR000008 C2_dom 262 359
IPR000008 C2_dom 422 524
No external refs found!