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Description : regulatory protein *(LMI1) of floral meristem identity control & HD-ZIP I/II-type transcription factor
Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.J02798.1 | |
| Cluster | HCAA Clusters: Cluster_207 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g26960 | No alias | Homeobox-leucine zipper protein ATHB-23... | 0.03 | Orthogroups_2024-Update | |
| Brara.B00111.1 | No alias | regulatory protein *(LMI1) of floral meristem identity... | 0.04 | Orthogroups_2024-Update | |
| Brara.E00112.1 | No alias | HD-ZIP I/II-type transcription factor | 0.04 | Orthogroups_2024-Update | |
| Brara.H01761.1 | No alias | HD-ZIP I/II-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| Brara.H02166.1 | No alias | HD-ZIP I/II-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| HORVU2Hr1G092300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| LOC_Os09g21180 | No alias | homeobox associated leucine zipper, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_169305g0010 | No alias | (at2g22430 : 149.0) Encodes a homeodomain leucine zipper... | 0.02 | Orthogroups_2024-Update | |
| MA_799187g0010 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
| Potri.001G395100 | No alias | homeobox protein 52 | 0.03 | Orthogroups_2024-Update | |
| Seita.1G253700.1 | No alias | HD-ZIP I/II-type transcription factor | 0.05 | Orthogroups_2024-Update | |
| Seita.2G193200.1 | No alias | HD-ZIP I/II-type transcription factor | 0.04 | Orthogroups_2024-Update | |
| Seita.6G145000.1 | No alias | HD-ZIP I/II-type transcription factor | 0.02 | Orthogroups_2024-Update | |
| Sobic.007G226600.3 | No alias | HD-ZIP I/II-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| Solyc02g062960 | No alias | Homeobox-leucine zipper family protein (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update | |
| Solyc02g077590 | No alias | Homeobox-leucine zipper protein family (AHRD V3.3 *-*... | 0.03 | Orthogroups_2024-Update | |
| Solyc03g113270 | No alias | LEVAHOX1G L.esculentum homeobox | 0.04 | Orthogroups_2024-Update | |
| Sopen03g032330 | No alias | Homeobox domain | 0.02 | Orthogroups_2024-Update | |
| Sopen06g018290 | No alias | Homeobox domain | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006914 | autophagy | IEP | Predicted GO |
| MF | GO:0008289 | lipid binding | IEP | Predicted GO |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Predicted GO |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | Predicted GO |
| MF | GO:0043130 | ubiquitin binding | IEP | Predicted GO |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001356 | Homeobox_dom | 78 | 130 |
| No external refs found! |