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  5. Brara.J02867.1

Brara.J02867.1


Description : Unknown function


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J02867.1
Cluster HCAA Clusters: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
A4A49_28236 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At5g66110 No alias Heavy metal-associated isoprenylated plant protein 27... 0.03 Orthogroups_2024-Update
Bradi1g62660 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g04270 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Brara.I03270.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I03867.1 No alias copper chaperone *(ATX/CCH) 0.04 Orthogroups_2024-Update
Cre09.g392467 No alias homolog of anti-oxidant 1 0.01 Orthogroups_2024-Update
GRMZM2G085086 No alias Heavy metal transport/detoxification superfamily protein 0.06 Orthogroups_2024-Update
Glyma.08G180500 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G264100 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G291700 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G011070.4 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G118340.7 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os03g22490 No alias heavy metal-associated domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g60480 No alias heavy metal-associated domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g05010 No alias heavy-metal-associated domain-containing protein,... 0.02 Orthogroups_2024-Update
Mp2g25910.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Pp1s55_32V6 No alias copper chaperone 0.03 Orthogroups_2024-Update
Pp1s67_56V6 No alias copper chaperone 0.04 Orthogroups_2024-Update
Seita.2G397300.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Solyc04g072700 No alias Heavy metal transport/detoxification superfamily protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Predicted GO
MF GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEP Predicted GO
MF GO:0001012 RNA polymerase II regulatory region DNA binding IEP Predicted GO
MF GO:0001067 regulatory region nucleic acid binding IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
MF GO:0032422 purine-rich negative regulatory element binding IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0044212 transcription regulatory region DNA binding IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 279 331
No external refs found!