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  5. Brara.J02899.1

Brara.J02899.1


Description : Unknown function


Gene families : OG_42_0000045 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J02899.1
Cluster HCAA Clusters: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
A4A49_29331 No alias thaumatin-like protein 0.02 Orthogroups_2024-Update
A4A49_53085 No alias thaumatin-like protein 1a 0.02 Orthogroups_2024-Update
At1g19320 No alias At1g19320 [Source:UniProtKB/TrEMBL;Acc:Q9LN66] 0.04 Orthogroups_2024-Update
Bradi3g40596 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os08g43510 No alias thaumatin, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g43490 No alias thaumatin, putative, expressed 0.03 Orthogroups_2024-Update
Mp2g01690.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Potri.002G020400 No alias Pathogenesis-related thaumatin superfamily protein 0.02 Orthogroups_2024-Update
Potri.005G241000 No alias Pathogenesis-related thaumatin superfamily protein 0.05 Orthogroups_2024-Update
Potri.T094100 No alias osmotin 34 0.02 Orthogroups_2024-Update
Sobic.001G145600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G250100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G449200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G253200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen01g033850 No alias Thaumatin family 0.02 Orthogroups_2024-Update
Sopen02g032270 No alias Thaumatin family 0.03 Orthogroups_2024-Update
Sopen08g028910 No alias Thaumatin family 0.03 Orthogroups_2024-Update
Sopen11g008310 No alias Thaumatin family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
InterPro domains Description Start Stop
IPR001938 Thaumatin 31 246
No external refs found!