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  5. Brara.K00033.1

Brara.K00033.1


Description : E3 ubiquitin ligase *(RMA/MUSE)


Gene families : OG_42_0000548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00033.1
Cluster HCAA Clusters: Cluster_389

Target Alias Description ECC score Gene Family Method Actions
402081 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
A4A49_02918 No alias e3 ubiquitin-protein ligase rma1h1 0.02 Orthogroups_2024-Update
Cre17.g739100 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Glyma.07G196000 No alias RING membrane-anchor 1 0.04 Orthogroups_2024-Update
Glyma.12G112000 No alias RING membrane-anchor 1 0.03 Orthogroups_2024-Update
Potri.019G100800 No alias RING membrane-anchor 1 0.03 Orthogroups_2024-Update
Seita.9G305200.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR027370 Znf-RING_LisH 22 72
No external refs found!