1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.K00035.1

Brara.K00035.1


Description : beta-class expansin


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00035.1
Cluster HCAA Clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
171427 No alias expansin B3 0.03 Orthogroups_2024-Update
A4A49_26120 No alias expansin-b3 0.03 Orthogroups_2024-Update
A4A49_31181 No alias expansin-b3 0.03 Orthogroups_2024-Update
Bradi3g33130 No alias expansin B2 0.03 Orthogroups_2024-Update
Bradi3g50740 No alias expansin B2 0.03 Orthogroups_2024-Update
Brara.A01798.1 No alias beta-class expansin 0.04 Orthogroups_2024-Update
Brara.E00482.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.G00015.1 No alias beta-class expansin 0.03 Orthogroups_2024-Update
GRMZM2G405622 No alias expansin B2 0.04 Orthogroups_2024-Update
LOC_Os02g44108 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g01270 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_10427897g0010 No alias (q7x6j9|exb17_orysa : 304.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
MA_166764g0010 No alias (q7x6j9|exb17_orysa : 194.0) Expansin-B17 precursor... 0.02 Orthogroups_2024-Update
PSME_00009595-RA No alias (q7x6j9|exb17_orysa : 96.7) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
Potri.019G101900 No alias expansin B3 0.03 Orthogroups_2024-Update
Pp1s147_37V6 No alias beta-expansin 3 0.03 Orthogroups_2024-Update
Pp1s251_59V6 No alias beta-expansin 3 0.04 Orthogroups_2024-Update
Sobic.001G300800.2 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.001G301300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G301500.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.001G301600.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 165 246
IPR009009 RlpA-like_DPBB 75 153
No external refs found!