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  5. At2g36730

At2g36730


Description : Pentatricopeptide repeat-containing protein At2g36730 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQA1]


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g36730
Cluster HCCA clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
108652 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
82058 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
At1g74600 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.04 Orthogroups_2024-Update
Bradi1g36010 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Bradi1g53600 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Orthogroups_2024-Update
Bradi1g72290 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Orthogroups_2024-Update
Bradi3g57730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi4g40340 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Brara.F03349.1 No alias RNA editing factor *(REME1) & RNA editing factor *(OTP87) 0.05 Orthogroups_2024-Update
Brara.I02594.1 No alias Unknown function 0.06 Orthogroups_2024-Update
GRMZM2G060536 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G111780 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G228000 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G006900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G074100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G239300 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.16G206000 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G026400 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.19G102300 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G074220.1 No alias RNA editing factor *(MEF21) 0.03 Orthogroups_2024-Update
HORVU2Hr1G081690.1 No alias RNA editing factor *(OTP86) 0.03 Orthogroups_2024-Update
HORVU5Hr1G101000.3 No alias RNA editing factor *(DEK36) 0.03 Orthogroups_2024-Update
MA_122546g0010 No alias (at3g13770 : 499.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
MA_124868g0020 No alias (at4g13650 : 517.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
MA_31170g0010 No alias (at1g11290 : 681.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
MA_835083g0010 No alias (at1g11290 : 592.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
PSME_00003207-RA No alias (at3g03580 : 671.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
PSME_00006334-RA No alias (at3g23330 : 550.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
PSME_00008064-RA No alias (at3g49170 : 637.0) embryo defective 2261 (EMB2261);... 0.03 Orthogroups_2024-Update
PSME_00012885-RA No alias (at1g08070 : 603.0) Encodes a chloroplast RNA editing... 0.03 Orthogroups_2024-Update
PSME_00013800-RA No alias (at2g03880 : 405.0) Pentatricopeptide repeat (PPR)... 0.05 Orthogroups_2024-Update
PSME_00020178-RA No alias (at3g03580 : 731.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00021735-RA No alias (at4g33170 : 600.0) Tetratricopeptide repeat (TPR)-like... 0.05 Orthogroups_2024-Update
PSME_00022065-RA No alias (at3g57430 : 642.0) Encodes a chloroplast RNA editing... 0.04 Orthogroups_2024-Update
PSME_00024026-RA No alias (at4g20770 : 565.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00032414-RA No alias (at2g27610 : 637.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
PSME_00034399-RA No alias (at4g33170 : 426.0) Tetratricopeptide repeat (TPR)-like... 0.06 Orthogroups_2024-Update
PSME_00038705-RA No alias (at3g23330 : 523.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
PSME_00045217-RA No alias (at4g18750 : 610.0) Encodes a pentatricopeptide (PPR)... 0.04 Orthogroups_2024-Update
Potri.003G058700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G106500 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s15_448V6 No alias MZB10.7; pentatricopeptide (PPR) repeat-containing... 0.02 Orthogroups_2024-Update
Pp1s26_188V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.7G324400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G075300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G030100.1 No alias RNA editing factor *(CWM1) 0.04 Orthogroups_2024-Update
Solyc01g110010 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc04g016540 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc04g076330 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc06g076900 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc10g008590 No alias Pentatricopeptide repeat-containing protein, putative... 0.03 Orthogroups_2024-Update
Sopen01g032600 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen05g002740 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen09g004810 No alias PPR repeat 0.04 Orthogroups_2024-Update
Sopen11g004720 No alias PPR repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 79 109
IPR002885 Pentatricopeptide_repeat 352 376
IPR002885 Pentatricopeptide_repeat 177 224
IPR002885 Pentatricopeptide_repeat 276 324
No external refs found!