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  5. Brara.K00055.1

Brara.K00055.1


Description : anion channel *(SLAC)


Gene families : OG_42_0000546 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000546_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00055.1
Cluster HCAA Clusters: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
122390 No alias SLAC1 homologue 2 0.05 Orthogroups_2024-Update
A4A49_32931 No alias s-type anion channel slah3 0.03 Orthogroups_2024-Update
Glyma.10G229300 No alias SLAC1 homologue 3 0.04 Orthogroups_2024-Update
Potri.015G026700 No alias SLAC1 homologue 3 0.03 Orthogroups_2024-Update
Seita.5G000800.1 No alias anion channel *(SLAC) 0.03 Orthogroups_2024-Update
Sopen03g003690 No alias Voltage-dependent anion channel 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR004695 Voltage-dep_anion_channel 142 445
No external refs found!