Brara.K00100.1

Description : Unknown function

Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.K00100.1
Cluster	HCAA Clusters: Cluster_284

Target	Alias	Description	ECC score	Gene Family Method
At1g63350	No alias	Disease resistance protein (CC-NBS-LRR class) family...	0.03	Orthogroups_2024-Update
At4g27220	No alias	NB-ARC domain-containing disease resistance protein...	0.03	Orthogroups_2024-Update
At5g43730	No alias	Probable disease resistance protein At5g43730...	0.04	Orthogroups_2024-Update
Brara.A03110.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.I03326.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Glyma.18G280432	No alias	NB-ARC domain-containing disease resistance protein	0.04	Orthogroups_2024-Update
HORVU3Hr1G108500.3	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os04g39460	No alias	NBS-LRR type disease resistance protein, putative, expressed	0.03	Orthogroups_2024-Update
MA_10062820g0010	No alias	(at1g12280 : 143.0) LRR and NB-ARC domains-containing...	0.02	Orthogroups_2024-Update
MA_10426603g0010	No alias	(at4g27220 : 233.0) NB-ARC domain-containing disease...	0.03	Orthogroups_2024-Update
MA_10426937g0020	No alias	(at4g26090 : 162.0) Encodes a plasma membrane protein...	0.03	Orthogroups_2024-Update
MA_549555g0010	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
MA_728287g0010	No alias	(at1g61300 : 175.0) LRR and NB-ARC domains-containing...	0.03	Orthogroups_2024-Update
MA_837862g0010	No alias	(at5g63020 : 95.5) Disease resistance protein...	0.03	Orthogroups_2024-Update
MA_90078g0010	No alias	(at1g12220 : 94.7) Resistance gene, mediates resistance...	0.02	Orthogroups_2024-Update
MA_9234097g0010	No alias	(at1g61190 : 91.3) LRR and NB-ARC domains-containing...	0.03	Orthogroups_2024-Update
PSME_00026738-RA	No alias	(at1g61180 : 216.0) LRR and NB-ARC domains-containing...	0.02	Orthogroups_2024-Update
PSME_00045398-RA	No alias	(at1g12280 : 140.0) LRR and NB-ARC domains-containing...	0.03	Orthogroups_2024-Update
PSME_00045900-RA	No alias	(at1g12220 : 213.0) Resistance gene, mediates resistance...	0.03	Orthogroups_2024-Update
PSME_00051384-RA	No alias	(at1g63350 : 167.0) Disease resistance protein...	0.02	Orthogroups_2024-Update
Potri.001G405025	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.T003800	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.T013566	No alias	NB-ARC domain-containing disease resistance protein	0.04	Orthogroups_2024-Update
Potri.T027300	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.T027700	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Seita.2G176400.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc06g048910	No alias	LOW QUALITY:Disease resistance protein (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Sopen06g015230	No alias	NB-ARC domain	0.02	Orthogroups_2024-Update
Sopen08g004810	No alias	NB-ARC domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	16Dec
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	16Dec
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Predicted GO
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Predicted GO
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Predicted GO
MF	GO:0003997	acyl-CoA oxidase activity	IEP	Predicted GO
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Predicted GO
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Predicted GO
CC	GO:0005681	spliceosomal complex	IEP	Predicted GO
CC	GO:0005777	peroxisome	IEP	Predicted GO
BP	GO:0006082	organic acid metabolic process	IEP	Predicted GO
BP	GO:0006541	glutamine metabolic process	IEP	Predicted GO
BP	GO:0006542	glutamine biosynthetic process	IEP	Predicted GO
BP	GO:0006631	fatty acid metabolic process	IEP	Predicted GO
BP	GO:0006635	fatty acid beta-oxidation	IEP	Predicted GO
BP	GO:0006914	autophagy	IEP	Predicted GO
BP	GO:0008380	RNA splicing	IEP	Predicted GO
BP	GO:0009062	fatty acid catabolic process	IEP	Predicted GO
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0016042	lipid catabolic process	IEP	Predicted GO
BP	GO:0016054	organic acid catabolic process	IEP	Predicted GO
MF	GO:0016211	ammonia ligase activity	IEP	Predicted GO
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Predicted GO
BP	GO:0019395	fatty acid oxidation	IEP	Predicted GO
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0030258	lipid modification	IEP	Predicted GO
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0034440	lipid oxidation	IEP	Predicted GO
CC	GO:0042579	microbody	IEP	Predicted GO
BP	GO:0043436	oxoacid metabolic process	IEP	Predicted GO
BP	GO:0044242	cellular lipid catabolic process	IEP	Predicted GO
BP	GO:0044248	cellular catabolic process	IEP	Predicted GO
BP	GO:0044255	cellular lipid metabolic process	IEP	Predicted GO
BP	GO:0044282	small molecule catabolic process	IEP	Predicted GO
BP	GO:0046395	carboxylic acid catabolic process	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Predicted GO
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Predicted GO
MF	GO:0070403	NAD+ binding	IEP	Predicted GO
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	Predicted GO
CC	GO:1902554	serine/threonine protein kinase complex	IEP	Predicted GO
CC	GO:1902911	protein kinase complex	IEP	Predicted GO
CC	GO:1990316	Atg1/ULK1 kinase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	154	391
IPR001611	Leu-rich_rpt	529	586

External Links

No external refs found!

Brara.K00100.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation