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Description : subunit beta of tryptophan synthase complex & EC_4.2 carbon-oxygen lyase
Gene families : OG_42_0002861 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002861_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.K00111.1 | |
| Cluster | HCAA Clusters: Cluster_18 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GRMZM2G169593 | No alias | tryptophan synthase beta-subunit 1 | 0.03 | Orthogroups_2024-Update | |
| Mp4g12300.1 | No alias | subunit beta of tryptophan synthase complex | 0.02 | Orthogroups_2024-Update | |
| Seita.6G072900.1 | No alias | subunit beta of tryptophan synthase complex & EC_4.2... | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Predicted GO |
| MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004506 | squalene monooxygenase activity | IEP | Predicted GO |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | Predicted GO |
| BP | GO:0006534 | cysteine metabolic process | IEP | Predicted GO |
| BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | Predicted GO |
| BP | GO:0006563 | L-serine metabolic process | IEP | Predicted GO |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Predicted GO |
| BP | GO:0006979 | response to oxidative stress | IEP | Predicted GO |
| MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
| MF | GO:0009001 | serine O-acetyltransferase activity | IEP | Predicted GO |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Predicted GO |
| MF | GO:0016407 | acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0016412 | serine O-acyltransferase activity | IEP | Predicted GO |
| MF | GO:0016413 | O-acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Predicted GO |
| BP | GO:0019344 | cysteine biosynthetic process | IEP | Predicted GO |
| MF | GO:0019842 | vitamin binding | IEP | Predicted GO |
| MF | GO:0030151 | molybdenum ion binding | IEP | Predicted GO |
| BP | GO:0030163 | protein catabolic process | IEP | Predicted GO |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | Predicted GO |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Predicted GO |
| MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Predicted GO |
| MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
| MF | GO:0070279 | vitamin B6 binding | IEP | Predicted GO |
| MF | GO:0071949 | FAD binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001926 | PLP-dep | 127 | 457 |
| No external refs found! |