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  5. Brara.K00197.1

Brara.K00197.1


Description : transcription factor *(CBF/DREB1) & subgroup ERF-III transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00197.1
Cluster HCAA Clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
A4A49_16905 No alias ethylene-responsive transcription factor 5 0.03 Orthogroups_2024-Update
A4A49_18156 No alias ethylene-responsive transcription factor shine 3 0.05 Orthogroups_2024-Update
A4A49_38093 No alias ethylene-responsive transcription factor erf034 0.03 Orthogroups_2024-Update
At1g28360 No alias Ethylene-responsive transcription factor 12... 0.02 Orthogroups_2024-Update
At5g18450 No alias Dehydration-responsive element-binding protein 2G... 0.03 Orthogroups_2024-Update
At5g52020 No alias Ethylene-responsive transcription factor ERF025... 0.05 Orthogroups_2024-Update
Brara.I05089.1 No alias subgroup ERF-VIII transcription factor 0.05 Orthogroups_2024-Update
GRMZM2G057386 No alias ethylene responsive element binding factor 5 0.03 Orthogroups_2024-Update
Glyma.07G250100 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G115300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G082310.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g54160 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_83118g0010 No alias (at1g78080 : 90.5) Encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00033961-RA No alias (at5g21960 : 122.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00051454-RA No alias (at1g19210 : 98.6) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00051455-RA No alias (at5g21960 : 102.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Potri.005G077300 No alias related to AP2 4 0.03 Orthogroups_2024-Update
Potri.008G073600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s67_144V6 No alias ap2 domain transcription factor 0.03 Orthogroups_2024-Update
Pp1s7_472V6 No alias ap2 erf domain-containing transcription factor 0.05 Orthogroups_2024-Update
Seita.1G187900.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Seita.1G248300.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Seita.3G289200.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.03 Orthogroups_2024-Update
Seita.5G115000.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.05 Orthogroups_2024-Update
Seita.5G394300.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Seita.8G012200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G268700.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G298100.1 No alias subgroup ERF-III transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G481600.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G296900.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G181500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G101400.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.03 Orthogroups_2024-Update
Solyc10g050970 No alias Ethylene Response Factor D.4 0.05 Orthogroups_2024-Update
Sopen02g037700 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 49 99
No external refs found!