1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.K00317.1

Brara.K00317.1


Description : Unknown function


Gene families : OG_42_0000109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00317.1
Cluster HCAA Clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Bradi1g67760 No alias beta-galactosidase 8 0.02 Orthogroups_2024-Update
GRMZM2G038281 No alias beta-galactosidase 10 0.03 Orthogroups_2024-Update
HORVU3Hr1G050450.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
PSME_00001344-RA No alias (p45582|bgal_aspof : 301.0) Beta-galactosidase precursor... 0.03 Orthogroups_2024-Update
PSME_00030788-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00036669-RA No alias (at4g36360 : 122.0) putative beta-galactosidase (BGAL3... 0.02 Orthogroups_2024-Update
Potri.006G144500 No alias beta galactosidase 1 0.02 Orthogroups_2024-Update
Seita.2G290500.1 No alias beta-galactosidase *(MUM2) & EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Sobic.002G279900.1 No alias beta-galactosidase *(MUM2) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sopen07g018350 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR031330 Gly_Hdrlase_35_cat 1 162
IPR000922 Lectin_gal-bd_dom 568 648
No external refs found!